Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.54□□□□□ -0.24
Gfra3O35118 Mir5126-201ENSMUST00000175513 77 ntBASIC13.54□□□□□ -0.24
Gfra3O35118 Gm6550-201ENSMUST00000187574 993 ntBASIC13.54□□□□□ -0.24
Gfra3O35118 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Gfra3O35118 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Gfra3O35118 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.54□□□□□ -0.24
Gfra3O35118 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Gfra3O35118 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.54□□□□□ -0.24
Gfra3O35118 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gfra3O35118 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Gfra3O35118 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gfra3O35118 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Gfra3O35118 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.53□□□□□ -0.24
Gfra3O35118 Gm27646-201ENSMUST00000183989 110 ntBASIC13.53□□□□□ -0.24
Gfra3O35118 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.53□□□□□ -0.24
Gfra3O35118 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.53□□□□□ -0.24
Gfra3O35118 Gm6443-201ENSMUST00000203599 874 ntBASIC13.53□□□□□ -0.24
Gfra3O35118 AW822252-206ENSMUST00000208904 237 ntBASIC13.53□□□□□ -0.24
Gfra3O35118 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Gfra3O35118 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gfra3O35118 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.53□□□□□ -0.24
Gfra3O35118 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Gfra3O35118 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Gfra3O35118 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.53□□□□□ -0.24
Gfra3O35118 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.53□□□□□ -0.24
Gfra3O35118 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.53□□□□□ -0.24
Gfra3O35118 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gfra3O35118 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Gfra3O35118 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.52□□□□□ -0.24
Gfra3O35118 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gfra3O35118 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gfra3O35118 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gfra3O35118 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gfra3O35118 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gfra3O35118 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.52□□□□□ -0.24
Gfra3O35118 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gfra3O35118 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gfra3O35118 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Gfra3O35118 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.52□□□□□ -0.25
Gfra3O35118 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC13.52□□□□□ -0.25
Gfra3O35118 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.52□□□□□ -0.25
Gfra3O35118 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Gfra3O35118 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.52□□□□□ -0.25
Gfra3O35118 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Gfra3O35118 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Gfra3O35118 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gfra3O35118 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms