Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh2b3O09039 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sh2b3O09039 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sh2b3O09039 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.94□□□□□ -0.18
Sh2b3O09039 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.94□□□□□ -0.18
Sh2b3O09039 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.94□□□□□ -0.18
Sh2b3O09039 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sh2b3O09039 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2b3O09039 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Sh2b3O09039 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.93□□□□□ -0.18
Sh2b3O09039 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.93□□□□□ -0.18
Sh2b3O09039 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sh2b3O09039 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.93□□□□□ -0.18
Sh2b3O09039 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.93□□□□□ -0.18
Sh2b3O09039 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sh2b3O09039 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sh2b3O09039 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2b3O09039 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh2b3O09039 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh2b3O09039 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh2b3O09039 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Gm37935-201ENSMUST00000192012 982 ntBASIC13.92□□□□□ -0.18
Sh2b3O09039 Gm7506-201ENSMUST00000207758 815 ntBASIC13.92□□□□□ -0.18
Sh2b3O09039 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.92□□□□□ -0.18
Sh2b3O09039 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sh2b3O09039 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sh2b3O09039 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sh2b3O09039 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.92□□□□□ -0.18
Sh2b3O09039 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2b3O09039 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms