Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Thap2-203ENSMUST00000218989 527 ntBASIC18.81■□□□□ 0.6
NpcdF8VQB8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.81■□□□□ 0.6
NpcdF8VQB8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NpcdF8VQB8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.8■□□□□ 0.6
NpcdF8VQB8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NpcdF8VQB8 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.79■□□□□ 0.6
NpcdF8VQB8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Gm14127-201ENSMUST00000117906 678 ntBASIC18.79■□□□□ 0.6
NpcdF8VQB8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.79■□□□□ 0.6
NpcdF8VQB8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.79■□□□□ 0.6
NpcdF8VQB8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.78■□□□□ 0.6
NpcdF8VQB8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NpcdF8VQB8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NpcdF8VQB8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.77■□□□□ 0.6
NpcdF8VQB8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NpcdF8VQB8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms