Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Gm14701-201ENSMUST00000117156 348 ntBASIC18.76■□□□□ 0.59
Ube4aE9Q735 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.76■□□□□ 0.59
Ube4aE9Q735 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.76■□□□□ 0.59
Ube4aE9Q735 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4aE9Q735 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Gm15920-201ENSMUST00000118998 402 ntBASIC18.75■□□□□ 0.59
Ube4aE9Q735 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4aE9Q735 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.74■□□□□ 0.59
Ube4aE9Q735 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ube4aE9Q735 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4aE9Q735 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.73■□□□□ 0.59
Ube4aE9Q735 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.73■□□□□ 0.59
Ube4aE9Q735 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Gm20553-201ENSMUST00000204205 844 ntBASIC18.73■□□□□ 0.59
Ube4aE9Q735 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.73■□□□□ 0.59
Ube4aE9Q735 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4aE9Q735 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Gm2272-201ENSMUST00000194903 582 ntBASIC18.72■□□□□ 0.59
Ube4aE9Q735 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Ube4aE9Q735 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4aE9Q735 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.71■□□□□ 0.59
Ube4aE9Q735 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Gm13365-201ENSMUST00000121188 973 ntBASIC18.71■□□□□ 0.59
Ube4aE9Q735 Gm10499-201ENSMUST00000174094 934 ntBASIC18.71■□□□□ 0.59
Ube4aE9Q735 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ube4aE9Q735 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms