Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Gm18206-201ENSMUST00000207027 926 ntBASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb9E9Q5G2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Gm18489-201ENSMUST00000172565 551 ntBASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Gm43514-201ENSMUST00000198852 424 ntBASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Psmb5-202ENSMUST00000227257 622 ntBASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb9E9Q5G2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Gm4899-201ENSMUST00000178708 719 ntBASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Gm9682-201ENSMUST00000197505 556 ntBASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Gm5364-201ENSMUST00000216789 889 ntBASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb9E9Q5G2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Prob1-201ENSMUST00000097619 3021 ntBASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb9E9Q5G2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms