Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm42693-201ENSMUST00000196779 631 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.75□□□□□ -0.53
Col6a5A6H584 Gm45841-201ENSMUST00000207700 164 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.75□□□□□ -0.53
Col6a5A6H584 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col6a5A6H584 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col6a5A6H584 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a5A6H584 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col6a5A6H584 Gm27892-201ENSMUST00000185017 106 ntBASIC11.74□□□□□ -0.53
Col6a5A6H584 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.74□□□□□ -0.53
Col6a5A6H584 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a5A6H584 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a5A6H584 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.74□□□□□ -0.53
Col6a5A6H584 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col6a5A6H584 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Col6a5A6H584 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.74□□□□□ -0.53
Col6a5A6H584 Gm20445-201ENSMUST00000061905 565 ntBASIC11.74□□□□□ -0.53
Col6a5A6H584 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Gm42939-201ENSMUST00000197514 2205 ntBASIC11.74□□□□□ -0.53
Col6a5A6H584 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col6a5A6H584 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col6a5A6H584 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a5A6H584 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a5A6H584 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.73□□□□□ -0.53
Col6a5A6H584 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.73□□□□□ -0.53
Col6a5A6H584 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Gm44344-201ENSMUST00000200287 129 ntBASIC11.73□□□□□ -0.53
Col6a5A6H584 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.73□□□□□ -0.53
Col6a5A6H584 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a5A6H584 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col6a5A6H584 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col6a5A6H584 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a5A6H584 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a5A6H584 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a5A6H584 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms