Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Gm18246-201ENSMUST00000221023 728 ntBASIC12.64□□□□□ -0.39
Chd6A3KFM7 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.64□□□□□ -0.39
Chd6A3KFM7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Gm12134-201ENSMUST00000122109 520 ntBASIC12.64□□□□□ -0.39
Chd6A3KFM7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.64□□□□□ -0.39
Chd6A3KFM7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.64□□□□□ -0.39
Chd6A3KFM7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd6A3KFM7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm20445-201ENSMUST00000061905 565 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm10154-201ENSMUST00000084445 354 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm38225-201ENSMUST00000194001 393 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.63□□□□□ -0.39
Chd6A3KFM7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chd6A3KFM7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Gm9002-201ENSMUST00000178437 499 ntBASIC12.62□□□□□ -0.39
Chd6A3KFM7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.62□□□□□ -0.39
Chd6A3KFM7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.62□□□□□ -0.39
Chd6A3KFM7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd6A3KFM7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.61□□□□□ -0.39
Chd6A3KFM7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms