Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Gm18032-201ENSMUST00000222541 538 ntBASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-1A0N8R1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Trav12-1A0N8R1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav12-1A0N8R1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav12-1A0N8R1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav12-1A0N8R1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-1A0N8R1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Gm15565-201ENSMUST00000118890 427 ntBASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Gm9013-201ENSMUST00000132939 882 ntBASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12-1A0N8R1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12-1A0N8R1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms