Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Gm13036-201ENSMUST00000117799 748 ntBASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Gm14494-201ENSMUST00000118786 435 ntBASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.73■□□□□ 0.59
Cfap99A0A140LIX9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Gm9727-201ENSMUST00000161387 555 ntBASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap99A0A140LIX9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Cfap99A0A140LIX9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cfap99A0A140LIX9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cfap99A0A140LIX9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms