Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm12497-201ENSMUST00000138778 237 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm8825-201ENSMUST00000182565 998 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm4518-201ENSMUST00000182638 718 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv30A0A0B4J1P1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms