Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm7638-201ENSMUST00000121348 967 ntBASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm42642-201ENSMUST00000200683 355 ntBASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav4-3A0A0B4J1K1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4-3A0A0B4J1K1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4-3A0A0B4J1K1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav4-3A0A0B4J1K1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav4-3A0A0B4J1K1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4-3A0A0B4J1K1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms