Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Efs-202ENSMUST00000227037 2540 ntBASIC12.24□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-3A0A0B4J1H2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms