Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbc1A0A0A6YWV4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm9172-201ENSMUST00000212092 954 ntBASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbc1A0A0A6YWV4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbc1A0A0A6YWV4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
Trbc1A0A0A6YWV4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trbc1A0A0A6YWV4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.39□□□□□ -0.11
Trbc1A0A0A6YWV4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm12497-201ENSMUST00000138778 237 ntBASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.38□□□□□ -0.11
Trbc1A0A0A6YWV4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms