Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav21-dv12A0A075B6C4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mir7071-201ENSMUST00000184847 69 ntBASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav21-dv12A0A075B6C4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.08□□□□□ -0.47
Trav21-dv12A0A075B6C4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav21-dv12A0A075B6C4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Trav21-dv12A0A075B6C4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav21-dv12A0A075B6C4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm11950-201ENSMUST00000121615 838 ntBASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm6345-202ENSMUST00000180900 204 ntBASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav21-dv12A0A075B6C4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms