Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-5A0A075B6B9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm16061-201ENSMUST00000122167 857 ntBASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Mir6404-201ENSMUST00000183699 94 ntBASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-5A0A075B6B9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm7213-201ENSMUST00000215977 950 ntBASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm10566-201ENSMUST00000086739 996 ntBASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-5A0A075B6B9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms