Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Gm42569-201ENSMUST00000200539 472 ntBASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Gm29707-201ENSMUST00000196325 491 ntBASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-5A0A075B6B5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Gm26571-201ENSMUST00000181399 666 ntBASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-5A0A075B6B5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-5A0A075B6B5 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-5A0A075B6B5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms