Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Gm18032-201ENSMUST00000222541 538 ntBASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav9d-1A0A075B699 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Asic1-205ENSMUST00000228185 1818 ntBASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Gm9987-201ENSMUST00000069768 567 ntBASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9d-1A0A075B699 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9d-1A0A075B699 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms