Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm7787-201ENSMUST00000216858 688 ntBASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-1A0A075B5Z7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm18489-201ENSMUST00000172565 551 ntBASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5-1A0A075B5Z7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm14722-201ENSMUST00000118943 689 ntBASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav5-1A0A075B5Z7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms