Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1h3Q9Z0Y9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm8344-201ENSMUST00000119813 856 ntBASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Mir8117-201ENSMUST00000184773 107 ntBASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr1h3Q9Z0Y9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr1h3Q9Z0Y9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1h3Q9Z0Y9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1h3Q9Z0Y9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1h3Q9Z0Y9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1h3Q9Z0Y9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1h3Q9Z0Y9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr1h3Q9Z0Y9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm23935-201ENSMUST00000102303 57 ntBASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm24270-201ENSMUST00000102326 57 ntBASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm14822-201ENSMUST00000122247 291 ntBASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm24245-201ENSMUST00000157318 57 ntBASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Mir3113-201ENSMUST00000175478 76 ntBASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1h3Q9Z0Y9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Gm11873-201ENSMUST00000117877 1304 ntBASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h3Q9Z0Y9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms