Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm21814-202ENSMUST00000203277 873 ntBASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm715-201ENSMUST00000117865 831 ntBASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cx3cr1Q9Z0D9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm15039-201ENSMUST00000118914 875 ntBASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cx3cr1Q9Z0D9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cx3cr1Q9Z0D9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms