Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Gm44430-201ENSMUST00000203376 995 ntBASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm4Q9QXA5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Gm6257-201ENSMUST00000163864 910 ntBASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Mir6404-201ENSMUST00000183699 94 ntBASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm4Q9QXA5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm4Q9QXA5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm4Q9QXA5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm4Q9QXA5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms