Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Gm2651-201ENSMUST00000203560 838 ntBASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx5Q9JL61 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Gm7222-201ENSMUST00000117512 906 ntBASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rfx5Q9JL61 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Mir5126-201ENSMUST00000175513 77 ntBASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.53■□□□□ 0.24
Rfx5Q9JL61 AV026068-213ENSMUST00000223675 1171 ntBASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx5Q9JL61 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx5Q9JL61 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.52■□□□□ 0.24
Rfx5Q9JL61 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms