Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rhox4bQ9JI43 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Gm9731-201ENSMUST00000209480 747 ntBASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rhox4bQ9JI43 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Gm12896-201ENSMUST00000118430 226 ntBASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.71□□□□□ -0.37
Rhox4bQ9JI43 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rhox4bQ9JI43 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.7□□□□□ -0.38
Rhox4bQ9JI43 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms