Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Gm10517-202ENSMUST00000192970 758 ntBASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4bQ9ES00 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ube4bQ9ES00 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.12■□□□□ 0.01
Ube4bQ9ES00 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Gm10653-202ENSMUST00000139570 835 ntBASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4bQ9ES00 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4bQ9ES00 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4bQ9ES00 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms