Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgn3Q9DCB1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgn3Q9DCB1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgn3Q9DCB1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgn3Q9DCB1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgn3Q9DCB1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgn3Q9DCB1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgn3Q9DCB1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hmgn3Q9DCB1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hmgn3Q9DCB1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Gm15378-201ENSMUST00000121894 207 ntBASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgn3Q9DCB1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hmgn3Q9DCB1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgn3Q9DCB1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn3Q9DCB1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn3Q9DCB1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn3Q9DCB1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn3Q9DCB1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn3Q9DCB1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgn3Q9DCB1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms