Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Gm27459-201ENSMUST00000184860 107 ntBASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chmp2aQ9DB34 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chmp2aQ9DB34 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2aQ9DB34 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Grk6-207ENSMUST00000225925 2769 ntBASIC16.38■□□□□ 0.21
Chmp2aQ9DB34 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Gm4459-201ENSMUST00000118750 468 ntBASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Gm11452-201ENSMUST00000122376 690 ntBASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Sybu-209ENSMUST00000228639 4113 ntBASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2aQ9DB34 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms