Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rsph3bQ9DA80 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rsph3bQ9DA80 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Gm9727-201ENSMUST00000161387 555 ntBASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Gm5682-201ENSMUST00000173402 505 ntBASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.17■□□□□ 0.34
Rsph3bQ9DA80 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Gm11764-201ENSMUST00000120221 623 ntBASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rsph3bQ9DA80 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rsph3bQ9DA80 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rsph3bQ9DA80 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rsph3bQ9DA80 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rsph3bQ9DA80 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rsph3bQ9DA80 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms