Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx29Q9D3S3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx29Q9D3S3 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.17■□□□□ 0.34
Snx29Q9D3S3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Snx29Q9D3S3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx29Q9D3S3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx29Q9D3S3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx29Q9D3S3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Gm13616-201ENSMUST00000120600 222 ntBASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Gm11745-201ENSMUST00000121669 448 ntBASIC17.16■□□□□ 0.34
Snx29Q9D3S3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Rprl2-201ENSMUST00000157150 290 ntBASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Mir6956-201ENSMUST00000183598 62 ntBASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Gm2272-201ENSMUST00000194903 582 ntBASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx29Q9D3S3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Gm20553-201ENSMUST00000204205 844 ntBASIC17.15■□□□□ 0.34
Snx29Q9D3S3 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.15■□□□□ 0.34
Snx29Q9D3S3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx29Q9D3S3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Snx29Q9D3S3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Rpph1-201ENSMUST00000175096 319 ntBASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Mir6990-201ENSMUST00000183724 91 ntBASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx29Q9D3S3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.13■□□□□ 0.33
Snx29Q9D3S3 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms