Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tmem88Q9D0N8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Mir8112-201ENSMUST00000184382 131 ntBASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tmem88Q9D0N8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tmem88Q9D0N8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tmem88Q9D0N8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tmem88Q9D0N8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tmem88Q9D0N8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Tmem88Q9D0N8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tmem88Q9D0N8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tmem88Q9D0N8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tmem88Q9D0N8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
Tmem88Q9D0N8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Tmem88Q9D0N8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Gm13148-201ENSMUST00000118892 745 ntBASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 Rab3c-203ENSMUST00000224180 967 ntBASIC12.45□□□□□ -0.42
Tmem88Q9D0N8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms