Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr1Q9CY50 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 App-207ENSMUST00000227737 2827 ntBASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr1Q9CY50 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr1Q9CY50 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssr1Q9CY50 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms