Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc3Q9CW03 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Gm6257-201ENSMUST00000163864 910 ntBASIC18.48■□□□□ 0.55
Smc3Q9CW03 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smc3Q9CW03 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc3Q9CW03 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Smc3Q9CW03 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.47■□□□□ 0.55
Smc3Q9CW03 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.47■□□□□ 0.55
Smc3Q9CW03 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc3Q9CW03 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.47■□□□□ 0.55
Smc3Q9CW03 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.46■□□□□ 0.55
Smc3Q9CW03 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc3Q9CW03 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.46■□□□□ 0.54
Smc3Q9CW03 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Smc3Q9CW03 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc3Q9CW03 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smc3Q9CW03 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms