Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Gm22175-201ENSMUST00000175007 78 ntBASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Grk6-207ENSMUST00000225925 2769 ntBASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Gm18889-201ENSMUST00000174284 929 ntBASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Gm43125-201ENSMUST00000201724 730 ntBASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-1Q99MA9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Gm19164-201ENSMUST00000210667 640 ntBASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nkx6-1Q99MA9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Mir449b-201ENSMUST00000104833 80 ntBASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.65□□□□□ -0.06
Nkx6-1Q99MA9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms