Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd3Q99LE3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Gm18206-201ENSMUST00000207027 926 ntBASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Gm15590-201ENSMUST00000078419 552 ntBASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.28■□□□□ 0.2
Lysmd3Q99LE3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Lysmd3Q99LE3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd3Q99LE3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Gm1401-201ENSMUST00000122048 772 ntBASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd3Q99LE3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.25■□□□□ 0.19
Lysmd3Q99LE3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd3Q99LE3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd3Q99LE3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.24■□□□□ 0.19
Lysmd3Q99LE3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms