Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.1■□□□□ 0.49
Smc1bQ920F6 Gm14057-201ENSMUST00000120631 482 ntBASIC18.1■□□□□ 0.49
Smc1bQ920F6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.1■□□□□ 0.49
Smc1bQ920F6 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.1■□□□□ 0.49
Smc1bQ920F6 Gm10175-201ENSMUST00000086013 645 ntBASIC18.1■□□□□ 0.49
Smc1bQ920F6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc1bQ920F6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.09■□□□□ 0.49
Smc1bQ920F6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.09■□□□□ 0.49
Smc1bQ920F6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smc1bQ920F6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.09■□□□□ 0.49
Smc1bQ920F6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc1bQ920F6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Smc1bQ920F6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Smc1bQ920F6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.08■□□□□ 0.49
Smc1bQ920F6 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.08■□□□□ 0.49
Smc1bQ920F6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc1bQ920F6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Gm12497-201ENSMUST00000138778 237 ntBASIC18.08■□□□□ 0.48
Smc1bQ920F6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.08■□□□□ 0.48
Smc1bQ920F6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Smc1bQ920F6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms