Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Gm6376-201ENSMUST00000209407 580 ntBASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdha9Q91Y11 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 App-207ENSMUST00000227737 2827 ntBASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Gm13418-201ENSMUST00000119097 944 ntBASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Gm15358-201ENSMUST00000119249 520 ntBASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha9Q91Y11 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdha9Q91Y11 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Gm14722-201ENSMUST00000118943 689 ntBASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Mir8098-201ENSMUST00000184011 137 ntBASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha9Q91Y11 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms