Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.54■□□□□ 0.56
StrcQ8VIM6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
StrcQ8VIM6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
StrcQ8VIM6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
StrcQ8VIM6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
StrcQ8VIM6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
StrcQ8VIM6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.54■□□□□ 0.56
StrcQ8VIM6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Gm14928-201ENSMUST00000120198 477 ntBASIC18.53■□□□□ 0.56
StrcQ8VIM6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Asic1-205ENSMUST00000228185 1818 ntBASIC18.53■□□□□ 0.56
StrcQ8VIM6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
StrcQ8VIM6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
StrcQ8VIM6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
StrcQ8VIM6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
StrcQ8VIM6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
StrcQ8VIM6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
StrcQ8VIM6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Gm18187-201ENSMUST00000196476 984 ntBASIC18.51■□□□□ 0.55
StrcQ8VIM6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Gm24543-201ENSMUST00000103867 82 ntBASIC18.51■□□□□ 0.55
StrcQ8VIM6 Gm14042-201ENSMUST00000120139 833 ntBASIC18.51■□□□□ 0.55
StrcQ8VIM6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Gm9719-201ENSMUST00000162765 543 ntBASIC18.51■□□□□ 0.55
StrcQ8VIM6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.51■□□□□ 0.55
StrcQ8VIM6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
StrcQ8VIM6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
StrcQ8VIM6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.5■□□□□ 0.55
StrcQ8VIM6 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.5■□□□□ 0.55
StrcQ8VIM6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
StrcQ8VIM6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
StrcQ8VIM6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
StrcQ8VIM6 Gm27838-201ENSMUST00000184829 128 ntBASIC18.49■□□□□ 0.55
StrcQ8VIM6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.49■□□□□ 0.55
StrcQ8VIM6 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.49■□□□□ 0.55
StrcQ8VIM6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
StrcQ8VIM6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
StrcQ8VIM6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
StrcQ8VIM6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.49■□□□□ 0.55
StrcQ8VIM6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
StrcQ8VIM6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
StrcQ8VIM6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
StrcQ8VIM6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms