Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Gm7488-201ENSMUST00000117148 684 ntBASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Gm17837-201ENSMUST00000186435 985 ntBASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Gm12151-201ENSMUST00000121374 290 ntBASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Gm20553-201ENSMUST00000204205 844 ntBASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cspg4Q8VHY0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Gm6257-201ENSMUST00000163864 910 ntBASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cspg4Q8VHY0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cspg4Q8VHY0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms