Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim29Q8R2Q0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim29Q8R2Q0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Gm15165-201ENSMUST00000118140 502 ntBASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Gm9172-201ENSMUST00000212092 954 ntBASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim29Q8R2Q0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Gm10819-201ENSMUST00000099988 561 ntBASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim29Q8R2Q0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim29Q8R2Q0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Gm17807-201ENSMUST00000186869 298 ntBASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim29Q8R2Q0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms