Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Gm15590-201ENSMUST00000078419 552 ntBASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp40Q8R1F9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Gm13036-201ENSMUST00000117799 748 ntBASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rpp40Q8R1F9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.77■□□□□ 0.28
Rpp40Q8R1F9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpp40Q8R1F9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rpp40Q8R1F9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpp40Q8R1F9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpp40Q8R1F9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms