Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Gm2272-201ENSMUST00000194903 582 ntBASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Gm25857-201ENSMUST00000082788 129 ntBASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx54Q8K4L0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 AC124732.1-201ENSMUST00000221551 910 ntBASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx54Q8K4L0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Gm14928-201ENSMUST00000120198 477 ntBASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.45■□□□□ 0.86
Ddx54Q8K4L0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Iqck-206ENSMUST00000208658 2891 ntBASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Gm9824-201ENSMUST00000178707 561 ntBASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx54Q8K4L0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Gm15487-201ENSMUST00000122373 465 ntBASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx54Q8K4L0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms