Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cnot3Q8K0V4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cnot3Q8K0V4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cnot3Q8K0V4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cnot3Q8K0V4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cnot3Q8K0V4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms