Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.86■□□□□ 0.13
Clip4Q8CI96 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.86■□□□□ 0.13
Clip4Q8CI96 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.85■□□□□ 0.13
Clip4Q8CI96 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Gm44430-201ENSMUST00000203376 995 ntBASIC15.85■□□□□ 0.13
Clip4Q8CI96 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clip4Q8CI96 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.84■□□□□ 0.13
Clip4Q8CI96 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clip4Q8CI96 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clip4Q8CI96 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Clip4Q8CI96 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clip4Q8CI96 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.83■□□□□ 0.12
Clip4Q8CI96 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Clip4Q8CI96 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clip4Q8CI96 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clip4Q8CI96 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms