Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Efs-202ENSMUST00000227037 2540 ntBASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Gm15565-201ENSMUST00000118890 427 ntBASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox30Q8CGW4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Sox30Q8CGW4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Gm10013-201ENSMUST00000106074 672 ntBASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Gm5587-201ENSMUST00000206270 674 ntBASIC17.13■□□□□ 0.33
Sox30Q8CGW4 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.13■□□□□ 0.33
Sox30Q8CGW4 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sox30Q8CGW4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms