Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm9063-201ENSMUST00000223299 582 ntBASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.15■□□□□ 0.18
Rp1l1Q8CGM2 Gm11543-201ENSMUST00000120758 370 ntBASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm14767-201ENSMUST00000121559 586 ntBASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Gm27533-201ENSMUST00000183800 152 ntBASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rp1l1Q8CGM2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rp1l1Q8CGM2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rp1l1Q8CGM2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms