Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Gm1401-201ENSMUST00000122048 772 ntBASIC18.26■□□□□ 0.51
Vps53Q8CCB4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps53Q8CCB4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Gm15165-201ENSMUST00000118140 502 ntBASIC18.25■□□□□ 0.51
Vps53Q8CCB4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps53Q8CCB4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Gm27867-201ENSMUST00000184778 125 ntBASIC18.24■□□□□ 0.51
Vps53Q8CCB4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Gm44454-201ENSMUST00000198541 138 ntBASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps53Q8CCB4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps53Q8CCB4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps53Q8CCB4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms