Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Gm2274-201ENSMUST00000184539 609 ntBASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc46a2Q8CA03 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc46a2Q8CA03 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Gm6257-201ENSMUST00000163864 910 ntBASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Sybu-209ENSMUST00000228639 4113 ntBASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.1■□□□□ 0.01
Slc46a2Q8CA03 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Gm26039-201ENSMUST00000158152 144 ntBASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms