Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim9Q8C7M3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim9Q8C7M3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim9Q8C7M3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim9Q8C7M3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim9Q8C7M3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Gm18622-201ENSMUST00000219361 595 ntBASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim9Q8C7M3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Gm12644-201ENSMUST00000119935 606 ntBASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Gm28033-201ENSMUST00000184224 96 ntBASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim9Q8C7M3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim9Q8C7M3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms