Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Gm6257-201ENSMUST00000163864 910 ntBASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.12□□□□□ -0.15
Col6a6Q8C6K9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Gm5745-201ENSMUST00000183748 313 ntBASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Gm27622-201ENSMUST00000183779 60 ntBASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Col6a6Q8C6K9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Gm20553-201ENSMUST00000204205 844 ntBASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms