Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Gm7638-201ENSMUST00000121348 967 ntBASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tsen54Q8C2A2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tsen54Q8C2A2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 BC037039-201ENSMUST00000192003 2205 ntBASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms