Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC24.21■■□□□ 1.47
Pbrm1Q8BSQ9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pbrm1Q8BSQ9 Gm15163-201ENSMUST00000120749 1302 ntBASIC24.21■■□□□ 1.47
Pbrm1Q8BSQ9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC24.21■■□□□ 1.47
Pbrm1Q8BSQ9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pbrm1Q8BSQ9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC24.21■■□□□ 1.47
Pbrm1Q8BSQ9 Gm9899-201ENSMUST00000065519 555 ntBASIC24.21■■□□□ 1.47
Pbrm1Q8BSQ9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Pbrm1Q8BSQ9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Gm37748-201ENSMUST00000194379 1140 ntBASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 AC238811.1-201ENSMUST00000225302 441 ntBASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pbrm1Q8BSQ9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Gm3436-201ENSMUST00000179930 840 ntBASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 AC158529.1-201ENSMUST00000223618 239 ntBASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pbrm1Q8BSQ9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pbrm1Q8BSQ9 Gm18062-201ENSMUST00000208020 547 ntBASIC24.18■■□□□ 1.46
Pbrm1Q8BSQ9 Gm18055-201ENSMUST00000208254 547 ntBASIC24.18■■□□□ 1.46
Pbrm1Q8BSQ9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pbrm1Q8BSQ9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pbrm1Q8BSQ9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pbrm1Q8BSQ9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Pbrm1Q8BSQ9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pbrm1Q8BSQ9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Gm5566-201ENSMUST00000116118 459 ntBASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Gm11478-201ENSMUST00000117851 599 ntBASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Gm18018-201ENSMUST00000198273 408 ntBASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pbrm1Q8BSQ9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Gm4204-201ENSMUST00000110798 1231 ntBASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Gm15653-201ENSMUST00000119247 907 ntBASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Gm45668-201ENSMUST00000211271 493 ntBASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pbrm1Q8BSQ9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Gm5320-201ENSMUST00000207163 1519 ntBASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Gm6007-201ENSMUST00000208170 823 ntBASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 AC153962.4-201ENSMUST00000217878 242 ntBASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pbrm1Q8BSQ9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms